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View Structure Prediction Details

Protein: AGP20_ARATH
Organism: Arabidopsis thaliana
Length: 74 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGP20_ARATH.

Description E-value Query
Range
Subject
Range
AGP16_ARATH - Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1
90.0 [0..1] [73..1]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRNSVAVI ALFAFVFAVI SPFAGAQSLA PAPSPTSDGT SIDQGIAYLL MVVALVLTYL  60
   61 IHPLDASSSS YTFF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.886057
Match: PF06376.3
Description: No description for PF06376.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle