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View Structure Prediction Details

Protein: IPCS1_ARATH
Organism: Arabidopsis thaliana
Length: 305 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPCS1_ARATH.

Description E-value Query
Range
Subject
Range
gi|15081789 - gi|15081789|gb|AAK82549.1| AT3g54020/F5K20_320 [Arabidopsis thaliana]
343.0 [0..1] [305..1]

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Predicted Domain #1
Region A:
Residues: [1-57]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYIRREAS KLWRRFCSEI TTEIGLLAEN WKYLLAGLLC QYIHGLAARG VHYIHRP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [58-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPTLQDSGFF VLPELGQDKG FISETVFTCV FLSFFLWTFH PFIVKSKKIY TVLIWCRVLA  60
   61 FLVACQFLRV ITFYSTQLPG PNYHCREGSE LARLPRPHNV LEVLLLNFPR GVIYGCGDLI 120
  121 FSSHMIFTLV FVRTYQKYGS KRFIKLLGWV IAILQSLLII ASRKHYTVDV VVAWYTVNLV 180
  181 VFFLDKKLPE LPDRTTALLP VISKDRTKEE SHKLLNGNGV DPADRRPRAQ VNGKDSNGGH 240
  241 TDNATNGT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.51
Match: 2a96A
Description: No description for 2a96A was found.

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