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View Structure Prediction Details

Protein: HLS1L_ARATH
Organism: Arabidopsis thaliana
Length: 413 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HLS1L_ARATH.

Description E-value Query
Range
Subject
Range
HLS1_ARATH - Probable N-acetyltransferase HLS1 OS=Arabidopsis thaliana GN=HLS1 PE=1 SV=1
532.0 [0..4] [413..1]

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Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVLVEVREY DPSKDLATVE DVERRCEVGP AGKLSLFTDL LGDPICRVRH SPSYLMLVAE  60
   61 IGPKEKKELV GMIRGCIKTV TCGITTKRLD LTHNKSQNDV VITKPLYTKL AYILGLRVSP 120
  121 THRRQGIGFK LVKAMEDWFS QNGAEYSYFA TENDNHASVN LFTGKCGYAE FRTPSILVNP 180
  181 VYAHRVNISR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1u6mA
Description: The crystal structure of acetyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.44927632341056 bayes_pls_golite062009
transferase activity 1.29638283412179 bayes_pls_golite062009
transferase activity, transferring acyl groups 1.25574147031095 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.14025367092848 bayes_pls_golite062009
acyltransferase activity 1.11249291357784 bayes_pls_golite062009
N-acyltransferase activity 0.756613127653639 bayes_pls_golite062009
acetyltransferase activity 0.71069229070011 bayes_pls_golite062009
N-acetyltransferase activity 0.4223042426612 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [191-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RVTVIKLEPS DAELLYRLRF STTEFFPRDI DSVLNNKLSL GTFVAVPRGS CYGSGSRSWP  60
   61 GSAKFLEYPP DSWAVLSVWN CKDSFRLEVR GASRLRRVVS KATRMVDKTL PFLKIPSIPA 120
  121 VFRPFGLHFM YGIGGEGPRA EKMVKALCDH AHNLAKEGGC GVVAAEVAGE EPLRRGIPHW 180
  181 KVLSCAEDLW CIKRLGEDYS DGSVGDWTKS PPGDSIFVDP REF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle