| Protein: | gi|15240081, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 679 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240081, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
273.0 | [0..388] | [677..1] |
|
|
258.0 | [0..369] | [667..17] |
|
|
254.0 | [0..369] | [667..17] |
|
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253.0 | [0..372] | [667..20] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MYTSMHKDLR SRQNNSNQVG ADSESTRLVN IRNLAKIVND SRFRSLSPDT PATHDAQDYL 60
61 WPPSLDMPLL APPVNF
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [77-168] |
1 11 21 31 41 51
| | | | | |
1 SHLPLGITFT RKELELIKLT AQFVAVYGKY FQRELTTRVV ESPLFEFLKP TDSRNSFYTR 60
61 IILGYQGVLM PSQKLKTKSE VFDGFSKLIA QV
|
| Detection Method: | |
| Confidence: | 17.522879 |
| Match: | 2dt6A |
| Description: | No description for 2dt6A was found. |
|
Region A: Residues: [169-311] |
1 11 21 31 41 51
| | | | | |
1 PVKDEDDVEM AMTDLHAYEY FANMSINDLR APAPVKFAFL TRGVTFTRNE LDTIKLTAQF 60
61 VAVYGTLFRT ELMKRVFISP KFDFFKSTDS KCSFYLRLVD GYSRVLRRSR KNGAGLGEVV 120
121 VGFLKLLDQV VEKKDAVEMA LTD
|
| Detection Method: | |
| Confidence: | 18.045757 |
| Match: | 2dt7B |
| Description: | No description for 2dt7B was found. |
|
Region A: Residues: [312-371] |
1 11 21 31 41 51
| | | | | |
1 LHALEFFANV DGGVLQPRPE QYHPMMPTVP PLIMPQLGSQ FTQLQVPQPS CSPPVRMMSP 60
61
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.721 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.721 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.692 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.683 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.683 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.682 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.625 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.625 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.623 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.596 | a.4.1 | Homeodomain-like |
| View | Download | 0.579 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.578 | a.4.1 | Homeodomain-like |
| View | Download | 0.569 | a.4.1 | Homeodomain-like |
| View | Download | 0.522 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [372-493] |
1 11 21 31 41 51
| | | | | |
1 PRPQNDLQSG QSNSNKAPAS VAPIEPPPEI RSCVENTALI VSKNGLEIER KMMELSMNDA 60
61 RHRFVWSTDP YHAFYQLKLA EYRAQNQDRA HDIQPNVLRS FGFGFEFPEK EITLKELGII 120
121 KL
|
| Detection Method: | |
| Confidence: | 2.22 |
| Match: | 2e60A |
| Description: | No description for 2e60A was found. |
|
Region A: Residues: [494-612] |
1 11 21 31 41 51
| | | | | |
1 TAQFMARYGM NFVQGLRKRV VGNPQFKFLE STNNSRFSFY NGLVIAYSRV LMPSKMLSKS 60
61 DDCTATVVDG FLSCLQLEKR EEGVDIDMID LLDCFARLED ADYSANVPQP QHLSTQMQP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.651 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.599 | N/A | N/A | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.576 | N/A | N/A | a.69.2 | Ypt/Rab-GAP domain of gyp1p |
| View | Download | 0.416 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.412 | N/A | N/A | a.69.2 | Ypt/Rab-GAP domain of gyp1p |
| View | Download | 0.394 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.394 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.388 | N/A | N/A | a.8.8 | Description not found. |
| View | Download | 0.364 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.364 | N/A | N/A | a.74.1 | Cyclin-like |
|
Region A: Residues: [613-679] |
1 11 21 31 41 51
| | | | | |
1 PHTPETSPPL PLPLKNESSP VLADQHPDSS TIDDEWQVID FTGQSLPDNV ASLKDKTAGG 60
61 IQIPANK
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 1we6A |
| Description: | Solution structure of Ubiquitin-like domain in splicing factor AAL91182 |
Matching Structure (courtesy of the PDB): |
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