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View Structure Prediction Details

Protein: SUC7_ARATH
Organism: Arabidopsis thaliana
Length: 491 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUC7_ARATH.

Description E-value Query
Range
Subject
Range
gi|51971162 - gi|51971162|dbj|BAD44273.1| hypothetical protein [Arabidopsis thaliana]
235.0 [0..1] [491..1]

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Predicted Domain #1
Region A:
Residues: [1-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLQANKDE TTVDRQSSSS VDLDGPSPLR KMISVASIAA GIQFGWALQL SLLTPYVQLL  60
   61 GVPHKWPSFI WLCGPVSGLL VQPSVGYFSD RCTSRFGRRR PFIATGALLV AVSVVLIGYA 120
  121 ADFGHSMGDK IDKPVKMRAV VIFALGFWIL DVANNTLQGP CRAFLGDLAA GDAQKTRTAN 180
  181 AFFSFFMAVG NVLGYAAGSY TNLYKIFPFT MTKACDIYCA NLKSCFFLSI TLLLVVTIIA 240
  241 LWYVEDKQWS PKADSDNEKT PFFGEIFGAF KVMKRPMWML LIVTALNWIA WFPFLLYDTD 300
  301 WMGREVYGGD SKGDDKMKKL YNQGIHVGAL GLMLNSIVLG VMSLGIEGIS RKMGGAKRLW 360
  361 GAVNIILAVC LAMTVLVTKK AEEHRRIAGP MALPTDGIRA GALTLFALLG IPLAITFSIP 420
  421 FALASIISSS SGAGQRLSLG VLNMAIVIPQ MIVSFGVGPI DALFGDGNLP GFVVGAIAAA 480
  481 VSSIVAFTVL P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.69897
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle