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View Structure Prediction Details

Protein: GGPP9_ARATH
Organism: Arabidopsis thaliana
Length: 360 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GGPP9_ARATH.

Description E-value Query
Range
Subject
Range
GGPP3_ARATH - Geranylgeranyl pyrophosphate synthase 3, chloroplastic OS=Arabidopsis thaliana GN=GGPP3 PE=1 SV=1
345.0 [0..1] [360..1]

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Predicted Domain #1
Region A:
Residues: [1-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTVHLSSS SLFSQSRGRR DNSISSVKSL RKRTVLSLSS ALTSQDAGHM IQPEGKSNDN  60
   61 NSAFDFKLYM IRKAESVNAA LDVSVPLLKP LTIQEAVRYS LLAGGKRVRP LLCIAACELV 120
  121 GGDEATAMSA ACAVEMIHTS SLIHDDLPCM DNADLRRGKP TNHKVYGEDM AVLAGDALLA 180
  181 LAFEHMTVVS SGLVAPEKMI RAVVELARAI GTTGLVAGQM IDLASERLNP DKVGLEHLEF 240
  241 IHLHKTAALL EAAAVLGVIM GGGTEQEIEK LRKYARCIGL LFQVVDDILD VTKSTEELGK 300
  301 TAGKDVMAGK LTYPRLIGLE GSREVAEKLR REAEEQLLGF DPSKAAPLVA LASYIACRHN 360
  361 

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Detection Method: PSI-BLAST
Confidence: 80.0
Match: 2j1pA
Description: No description for 2j1pA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle