YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PR1B4_ARATH
Organism: Arabidopsis thaliana
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PR1B4_ARATH.

Description E-value Query
Range
Subject
Range
PR1B5_ARATH - PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1
211.0 [0..1] [205..1]

Back

Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSAPPVLP ISNPQTVPSA APSSVESQPP IATPAFRNFI NQITETVKNG LSKRRPWAEL  60
   61 ADRSALSKPE SISDAAVRIR KNYSYFKVNY LTVATAIVGF SLVTHPFSLV FLLCLLASWL 120
  121 FLYLFRPTDQ PIVLFGRTFS DRETLGCLIL FSIFVIFLTD VGSVLVSAMM IGVALICAHG 180
  181 AFRAPEDLFL DEQEPAATGF LSFLGGAASS AAPAVIAARV 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 80.69897
Match: PF03208.10
Description: No description for PF03208.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle