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View Structure Prediction Details

Protein: BAG6_ARATH
Organism: Arabidopsis thaliana
Length: 1043 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for BAG6_ARATH.

Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPVYMDPSQ PCQMRPQEYY YQGFGNNSQH MAMDAPPPCH GSCVHGNFPA YWPPCYPPQV  60
   61 PYHQCCMNRS AFHPPHASYA PSCYVHPPFP V

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [92-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYQPWFDVEK DVPGKHHCGK CSSQMCDLKK DRGVVIEEHE PEIEKGEAVL PVRSTNCPYP  60
   61 IIWIPHENAR NQEYRSSLGL GKHNQPPAEV RAPDNMTIQK SFPESWRGCF PFDESSMKSL 120
  121 VQNQDSKKAQ NGKTVEAPFD ISKFKSLLQG QDMKEAQIQK NKEELGQLTY PTSWVPSRRK 180
  181 RDDVEASESS NEDRKKMQNG KTVEYPFDIS MIKSLIQGQD VKEAQNQKNK EEPGQVPYPI 240
  241 FWIPSYGKRK DVEASESKES SNEGRNLESC PSDLHRNEGQ ITQAKGKEGN FECNVLSDAE 300
  301 EKSSVINIPV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.154902
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [402-483]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANHLQEPRNI PVKLSENHLP KPTEPTKRIA KNEPVKSTKK EQSSSSSEAS KLPPVCLRVD  60
   61 PLPKERNGGS KSVSHPKRME KS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [484-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KETKIAAPLS SKKAESRTVP EACNVKCEDA NAEMKMAEGS LNALRTEKGS VESNSNLQEE  60
   61 SNGEIIKPCE AKENREQPAK KSFTEEEAAR IIQSMYRGYD VRRWEPIKKL KEIATVREQM 120
  121 GDVKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.09691
Match: 2iw5A
Description: No description for 2iw5A was found.

Predicted Domain #5
Region A:
Residues: [609-939]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RIEALEASTD QHIEEKEIVV NGELVMNLLL KLDAVEGLHP SIREFRKALA TELSSIQDKL  60
   61 DSLKNSCASA EKEAVKEQVE IKSQPSDSPV NLEHSQLTEE NKMVSDTNLE KVLRLSPEEH 120
  121 PMSVLNRTDE KQAESAAETE EGYGLFETLA TDSKQATENA AAASSTTIPE KIGEVETVVP 180
  181 GNPPSADGNG MTVTNVEENK AMVVESLEEP INELPQMVEE TETNSIRDPE NASEVSEAET 240
  241 NSSENENRKG EDDIVLHSEK NVELSELPVG VIDEETQPLS QDPSSSYTRE GNMTAMDPKT 300
  301 ASQEETEVDH SPNNSKGIGQ QTSEPQDEKE Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.39794
Match: 2tmaA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #6
Region A:
Residues: [940-1043]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPETEVIVKE QPLETEVILN EQAPEPEITE PGISKETKKL MEENQRFKET METLVKAGRE  60
   61 QLEVISKLTS RVKSLEKKLS HKKKTQIRRR ASKPMSVSPT DAVL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle