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View Structure Prediction Details

Protein: FBX9_ARATH
Organism: Arabidopsis thaliana
Length: 376 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBX9_ARATH.

Description E-value Query
Range
Subject
Range
FB340_ARATH - Probable F-box protein At5g47300 OS=Arabidopsis thaliana GN=At5g47300 PE=3 SV=1
172.0 [0..1] [371..43]

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Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLPPDLVE DILSRVPATS LKRLRFTCKQ WNSLFKNRRF TEKHFCKAPK QSHVLLWKDY  60
   61 TVCPMSINLN FSGSSIEFKS VLSLKDSHYN SEQVYIAKVF HCDGLLLCTT KDHRLLVWNP 120
  121 CLGETRWINF ENDYKPYSRF SLGYKNNKSC RSYKILRFWT SYLTPNHIGL RYNIYEFTTD 180
  181 SWRVLIDKVS LNYFLIESEN GVSFKGNTYW LALDEET

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.30103
Match: 2ovpB
Description: No description for 2ovpB was found.

Predicted Domain #2
Region A:
Residues: [218-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFLLGFDFTM ERFKRLCLPS NKNCDTMVLS VVREEKLSVS HQNFCSSKMD IWMTNRIDSE  60
   61 TAMSWKRYFS VEFKILSMCH SLPFCNSFLI DEEKKIVIST VRGNENMVNI IGAYNAYYAE 120
  121 VPVESTNWPC SPYFVSYVPS LVQIQQCKSK ENNKTSLEM

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 53.356547
Match: PF07734.4
Description: No description for PF07734.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle