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View Structure Prediction Details

Protein: NDHN_ARATH
Organism: Arabidopsis thaliana
Length: 209 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDHN_ARATH.

Description E-value Query
Range
Subject
Range
gi|125528612 - gi|125528612|gb|EAY76726.1| hypothetical protein OsI_04681 [Oryza sativa Indica Group]
gi|20161441, gi|... - gi|50902188|ref|XP_463527.1| B1065E10.16 [Oryza sativa (japonica cultivar-group)], dbj|BAB90365.1| B...
269.0 [0..48] [205..46]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSRAICIQR VAPPCFEASQ VKKIKTVGSF LVNTRSKRRR STGVKCSSIA DYIGGDLVKP  60
   61 DIGQWLQDVE EHKAIAIYAP HEGGYEGRYL NRLKMQGYYF LDISARGLGD PETTLLKNYP 120
  121 VCPAHLGKQP IARWYYPPEV DYRLAALPPS AKGLVVWVLE AKVLSKSELQ FLALLPSLRP 180
  181 NVRVIAECGN WRKFVWKPLA EIANLAAQE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle