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View Structure Prediction Details

Protein: gi|7267929, gi|1...
Organism: Arabidopsis thaliana
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7267929, gi|1....

Description E-value Query
Range
Subject
Range
gi|30682078 - gi|30682078|ref|NP_192966.2| copper amine oxidase, putative [Arabidopsis thaliana]
399.0 [0..3] [300..269]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METPLREVRP KVTLVVRMVA SVGNYDYIID YEFQTDGVMR AKVGLSGMLM VKGTTYENKN  60
   61 QVKKDKEGNE EELYGTILSE NVIGVIHDHY VTFYLDLDVD GPDNSFVKVN LKRQETAPGE 120
  121 SPRKSYMKAV RNIVKTEKDG QIKLSLYDPS EYHVINPGKT TRVGNPTGYK VVPRATAASL 180
  181 LDHDDPPQKR GAFTNNQIWV TPYNKSEQWA SGLFTYQSHG DDTLAVWSDR DRDIENKDIV 240
  241 VWYTLGFHHI PCQEDFPIMP TVSSSFDLKP VNFFERNPIL KAAPNFEYDL PVCGAKSDSA 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 1w2zA
Description: PSAO and Xenon
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142231613649539 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle