YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|7267928, gi|1...
Organism: Arabidopsis thaliana
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7267928, gi|1....

Description E-value Query
Range
Subject
Range
gi|240255790, gi... - gi|28416507|gb|AAO42784.1| AT4g12290/T4C9_130 [Arabidopsis thaliana], gi|240255790|ref|NP_192966.5| ...
535.0 [0..1] [459..1]

Back

Predicted Domain #1
Region A:
Residues: [1-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPKLSSRLF LLITTACFIL LFTSTNFSQA PSSTAKLFDC TKSSSSPFCA SRNFLFNKNT  60
   61 RPISKNIPKT KPKNHDHVSD TPNHPLDPLT VMEINKVRSI LSSHALFASR VPHLLNSVVL 120
  121 EEPDKNLVRQ WEKGDQLPPR KASVIARVGG NSHLLIVDLS TSRVDQADSP VPESGYPIVT 180
  181 SEEMDSAASA PFSNADFNRT INSRGVNLTD VICIPISSGW FGNKDDNTKR VTKIQCFSTQ 240
  241 DTPNFYMRPI EGLTLLFDLD TKRILEITDT GQSIPIPGST NTDYRYSTLP NHDKTRPLNT 300
  301 ISLEQPRGPS FVIEDNHLVK WANWEFHLKP DPRAGLIMSQ VKIHDPDTQE TREVMYKGFV 360
  361 SELFVPYMDP SEAWYFKTYM DAGEYGFGLQ AMPLEPVAEP KNLFIGPLND CPRNAVYMDG 420
  421 TFAAADGTPY VRENMICVFE SYAGDIAWRH TEYPVNGMPN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 110.0
Match: 1w2zA
Description: PSAO and Xenon
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle