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View Structure Prediction Details

Protein: Y3IP1_ARATH
Organism: Arabidopsis thaliana
Length: 280 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y3IP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554237 - gi|21554237|gb|AAM63312.1| unknown [Arabidopsis thaliana]
538.0 [0..1] [280..1]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTQIFQLPL KYCASSFSST GQRNYGASSS PSPIVICKSN GISDGLWVKR RKNNRRFGSL  60
   61 IVKQEKGDVT EIRVPVPLTL EQQEKEKQNR DDEEDE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.751 d.17.1 Cystatin/monellin
View Download 0.722 d.17.1 Cystatin/monellin
View Download 0.720 d.17.1 Cystatin/monellin
View Download 0.711 d.17.1 Cystatin/monellin
View Download 0.662 d.17.1 Cystatin/monellin

Predicted Domain #2
Region A:
Residues: [97-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDEGDVDPED LKYVNEIKRV IELLRRNRDM IFSEVKLTIM IEDPRELERR RLLGIEDADT  60
   61 PSRDDLAEAL EQVNDGKIPK DRATLRMLHE EMIRWPNLEV EVSKKQRGKS MYAKSTDTGI 120
  121 DPKEAAKRLN VEWDSAAAIE EVDVDDEQGV VTKVAGYGAL YFVSALPVII GISVVLILFY 180
  181 NSLQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle