| Protein: | gi|9279617, gi|4... |
| Organism: | Arabidopsis thaliana |
| Length: | 532 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9279617, gi|4....
| Description | E-value | Query Range |
Subject Range |
|
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420.0 | [0..10] | [532..13] |
|
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402.0 | [0..63] | [493..75] |
|
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397.0 | [0..118] | [498..3] |
|
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394.0 | [0..118] | [491..3] |
|
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394.0 | [0..118] | [491..3] |
|
|
393.0 | [0..118] | [491..3] |
|
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393.0 | [0..118] | [491..3] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MDATSGTPSL QYINLPEQSV STTSPPVSPF QRPKRHCFGD TTPGEFPLAA NPSIVLHVLT 60
61 ECRLDPRDLA NLEATCSFFS QPANFAPDIN LSLSELAALD MCNKRVIFKP MNE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.800 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.765 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.740 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.714 | a.74.1 | Cyclin-like |
| View | Download | 0.671 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.671 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.668 | a.74.1 | Cyclin-like |
| View | Download | 0.626 | a.1.1 | Globin-like |
| View | Download | 0.587 | a.74.1 | Cyclin-like |
| View | Download | 0.311 | b.34.16 | Description not found. |
| View | Download | 0.258 | d.34.1 | DNA-binding domain of Mlu1-box binding protein MBP1 |
| View | Download | 0.249 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.228 | d.110.4 | SNARE-like |
| View | Download | 0.213 | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
|
Region A: Residues: [114-532] |
1 11 21 31 41 51
| | | | | |
1 EERQEMKRRC GGSWKLVLRF LLAGEACCRR EKSQAVAGPG HSVAVTSKGE VYTFGYNNSG 60
61 QLGHGHTEDE ARIQPVRSLQ GVRIIQAAAG AARTMLISDD GKVYACGKES FGEAEYGGQG 120
121 TKPVTTPQLV TSLKNIFVVQ AAIGNYFTAV LSREGKVYTF SWGNDGRLGH QTEAADVEPR 180
181 PLLGPLENVP VVQIAAGYCY LLALACQPNG MSVYSVGCGL GGKLGHGSRT DEKYPRVIEQ 240
241 FQILNLQPRV VAAGAWHAAV VGQDGRVCTW GWGRYGCLGH GNEECESVPK VVEGLSHVKA 300
301 VHVATGDYTT FVVSDDGDVY SFGCGESASL GHHPSFDEQG NRHANVLSPT VVTSLKQVNE 360
361 RMVQISLTNS IYWNAHTFAL TESGKLFAFG AGDQGQLGTE LGKNQKERCV PEKVDIDLS
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| Detection Method: | |
| Confidence: | 72.154902 |
| Match: | 1a12A |
| Description: | Regulator of chromosome condensation RCC1 |
Matching Structure (courtesy of the PDB): |
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