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View Structure Prediction Details

Protein: RH14_ARATH
Organism: Arabidopsis thaliana
Length: 619 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RH14_ARATH.

Description E-value Query
Range
Subject
Range
gi|17065030 - gi|17065030|gb|AAL32669.1| RNA helicase, DRH1 [Arabidopsis thaliana]
500.0 [0..1] [619..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAAASVV RYAPEDHTLP KPWKGLIDDR TGYLYFWNPE TNVTQYEKPT PSLPPKFSPA  60
   61 VSVSSSVQVQ QTDAYAPPKD DDKYSRGSER VSRFSEGG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.71
Match: 2yseA
Description: No description for 2yseA was found.

Predicted Domain #2
Region A:
Residues: [99-542]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSGPPYSNGA ANGVGDSAYG AASTRVPLPS SAPASELSPE AYSRRHEITV SGGQVPPPLM  60
   61 SFEATGFPPE LLREVLSAGF SAPTPIQAQS WPIAMQGRDI VAIAKTGSGK TLGYLIPGFL 120
  121 HLQRIRNDSR MGPTILVLSP TRELATQIQE EAVKFGRSSR ISCTCLYGGA PKGPQLRDLE 180
  181 RGADIVVATP GRLNDILEMR RISLRQISYL VLDEADRMLD MGFEPQIRKI VKEIPTKRQT 240
  241 LMYTATWPKG VRKIAADLLV NPAQVNIGNV DELVANKSIT QHIEVVAPME KQRRLEQILR 300
  301 SQEPGSKVII FCSTKRMCDQ LTRNLTRQFG AAAIHGDKSQ PERDNVLNQF RSGRTPVLVA 360
  361 TDVAARGLDV KDIRAVVNYD FPNGVEDYVH RIGRTGRAGA TGQAFTFFGD QDSKHASDLI 420
  421 KILEGANQRV PPQIREMATR GGGG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.39794
Match: 2i4iA
Description: No description for 2i4iA was found.

Predicted Domain #3
Region A:
Residues: [543-619]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKFSRWGPP SGGRGRGGDS GYGGRGSFAS RDSRSSNGWG RERERSRSPE RFNRAPPPSS  60
   61 TGSPPRSFHE TMMMKHR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.154902
Match: 1d9xA
Description: Nucleotide excision repair enzyme UvrB
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle