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View Structure Prediction Details

Protein: PME31_ARATH
Organism: Arabidopsis thaliana
Length: 317 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME31_ARATH.

Description E-value Query
Range
Subject
Range
gi|29602797 - gi|29602797|gb|AAO85706.1| pectin methyl-esterase [Nicotiana benthamiana]
340.0 [0..3] [316..265]

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Predicted Domain #1
Region A:
Residues: [1-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTRMVRVS QDGSGDYCSV QDAIDSVPLG NTCRTVIRLS PGIYRQPVYV PKRKNFITFA  60
   61 GISPEITVLT WNNTASKIEH HQASRVIGTG TFGCGSVIVE GEDFIAENIT FENSAPEGSG 120
  121 QAVAIRVTAD RCAFYNCRFL GWQDTLYLHH GKQYLKDCYI EGSVDFIFGN STALLEHCHI 180
  181 HCKSQGFITA QSRKSSQEST GYVFLRCVIT GNGQSGYMYL GRPWGPFGRV VLAYTYMDAC 240
  241 IRNVGWHNWG NAENERSACF YEYRCFGPGS CSSERVPWSR ELMDDEAGHF VHHSFVDPEQ 300
  301 DRPWLCLRMG VKTPYSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.221849
Match: 1xg2A
Description: Crystal structure of the complex between pectin methylesterase and its inhibitor protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle