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View Structure Prediction Details

Protein: gi|3702330, gi|1...
Organism: Arabidopsis thaliana
Length: 210 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3702330, gi|1....

Description E-value Query
Range
Subject
Range
Y2979_ARATH - Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis thaliana GN=At2g39790 PE=3 SV=2
212.0 [0..1] [209..1]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFAWCRSAS KLASVCGRFL SISAVVSLAP PRPMVSRGFL SSTAIDDRQS SNQMFLYMLC  60
   61 SGFIPPKVDD EPTPGINPYT IEDDGGKTVT LTRDYQEEYI VVVAGMPYEE YDGLCFPLTV 120
  121 NFTKKISGLS LEFRCTAFPL NGTSMNGVSV ISRGNYWEDQ RPCDLNVDYR HSYLRMIFDY 180
  181 SPKFALYKYM TTGTRKYVVW LKHLKKFLEE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.0
Match: 1p32A
Description: Acidic mitochondrial matrix protein p32
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle