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View Structure Prediction Details

Protein: IDH4_ARATH
Organism: Arabidopsis thaliana
Length: 294 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IDH4_ARATH.

Description E-value Query
Range
Subject
Range
gi|98660247, gi|... - gi|98660247|dbj|GAA02422.1| unnamed protein product [Pelotomaculum thermopropionicum SI], gi|1476788...
342.0 [0..3] [293..8]

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Predicted Domain #1
Region A:
Residues: [1-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRPVTVIDS NVTNAVHQVM DAMQAPVYFE TYIIKGKNMN HLTWEVVDSI RKNKVCLNGR  60
   61 VNNSLCGGAR KELDLFASLV DCFNLNGQPS RHENVDIVVI RENTEGEYAG REHEVVPGVI 120
  121 ESFQVTMTKF WSDRIAKYAF EYAHFSKRKK VTAVHNNGKY EKLADAFFLE SCQEVAKMYP 180
  181 NITYNEIASR ETRAIRRHSN SKSLWAIIAN IASGVAGGSF GDDYAIFEQV GSVGNHKNPV 240
  241 ALLFSSVMML RHLLLPLFAD RLKTAVTRVI SEGKCGNSNT TTQEVVDSVI ANLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.30103
Match: 1v5bA
Description: The Structure Of The Mutant, S225A and E251L, Of 3-Isopropylmalate Dehydrogenase From Bacillus Coagulans
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle