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View Structure Prediction Details

Protein: SUFE1_ARATH
Organism: Arabidopsis thaliana
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUFE1_ARATH.

Description E-value Query
Range
Subject
Range
gi|28393578 - gi|28393578|gb|AAO42209.1| unknown protein [Arabidopsis thaliana]
429.0 [0..14] [371..14]

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Predicted Domain #1
Region A:
Residues: [1-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAMSSSCC ASSLRLIPFK RTLFSSIHYP AKTLLLRPLK PSEVPSFRRT IITFQKISTG  60
   61 IVPPPSASSS PSSYGDLQPI EELPPKLQEI VKLFQSVQEP KAKYEQLMFY GKNLTPLDSQ 120
  121 FKTRENKVEG CVSQVWVRAF FDEERNVVYE ADSDSVLTKG LAALLVKGLS GRPVPEILRI 180
  181 TPDFAVLLGL QQSLSPSRNN GLLNMLKLMQ KKALHLEVKG EE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.69897
Match: 1ni7A
Description: Hypothetical protein YgdK
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.256292883613773 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [223-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSSSGESSES SFVSIPETKD EANVPEVDLE SKPDLVEDLG TEKIDDSESG SNVVALGSRG  60
   61 MRIREKLEKE LDPVELEVED VSYQHAGHAA VRGSAGDDGE THFNLRIVSD AFQGKSLVKR 120
  121 HRLIYDLLQD ELKSGLHALS IVAKTPAEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.154902
Match: 1v60A
Description: Solution structure of BolA1 protein from Mus musculus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle