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View Structure Prediction Details

Protein: Y1112_ARATH
Organism: Arabidopsis thaliana
Length: 820 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for Y1112_ARATH.

Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIHLGEIGI VLFPWFLWLS LFLSCGYAAI TISSPLTLGQ TLSSPGGFYE LGFFSPNNSQ  60
   61 NQYVGIWFKK ITPRVVVWVA NREKPITTPV ANLTISRNGS LILLDSSKNV VWSTRRPSIS 120
  121 NKCHAKLLDT GNLVIVDDVS ENLLWQSFEN PGDTMLPYSS LMYNLATGEK RVLSSWKSHT 180
  181 DPSPGDFVVR LTPQVPAQIV TM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 1dlpA
Description: Fetuin-binding protein Scafet precursor
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [203-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGSSVYKRSG PWAKTGFTGV PLMDESYTSP FSLSQDVGNG TGLFSYLQRS SELTRVIITS  60
   61 EGYLKTFRYN GTGWVLDFIT PANLCDLYGA CGPFGLCVTS NPTKCKCMKG FVPKYKEEWK 120
  121 RGNMTSGCMR RTELSCQANL STKTQGKGVD VFYRLANVKP PDLYEYASFV DADQCHQGCL 180
  181 SNCSCSAFAY ITGIGCLLWN HELIDTIRYS VGGE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [417-820]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FLSIRLASSE LAGSRRTKII VGSISLSIFV ILAFGSYKYW RYRAKQNVGP TWAFFNNSQD  60
   61 SWKNGLEPQE ISGLTFFEMN TIRAATNNFN VSNKLGQGGF GPVYKGTLSD KKDIAVKRLS 120
  121 SSSGQGTEEF MNEIKLISKL QHRNLVRLLG CCIDGEEKLL IYEFLVNKSL DTFLFDLTLK 180
  181 LQIDWPKRFN IIQGVSRGLL YLHRDSCMRV IHRDLKVSNI LLDDKMNPKI SDFGLARMFQ 240
  241 GTQHQDNTRK VVGTLGYMSP EYAWTGMFSE KSDIYAFGVL LLEIISGKKI SSFCCGEEGK 300
  301 TLLGHAWECW LETGGVDLLD EDISSSCSPV EVEVARCVQI GLLCIQQQAV DRPNIAQVVT 360
  361 MMTSATDLPR PKQPLFALQI QDQESVVSVS KSVNHVTQTE IYGR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.39794
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle