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View Structure Prediction Details

Protein: gi|25406763, gi|...
Organism: Arabidopsis thaliana
Length: 271 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25406763, gi|....

Description E-value Query
Range
Subject
Range
VSPA_SOYBN - Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1
308.0 [0..10] [270..5]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRTMFLSLT IASLLVGVVS AGDWNILNQL RGLGSSSSQN GIVSKGIKTD LKGYCESWRI  60
   61 NVEVHNIRKF DV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [73-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPQECVSHIK DYMTSSQYKD DVARTVDEVI LHFGSMCCSK SKCDGMDAWI FDIDDTLLST  60
   61 IPYHKKNGFF GGEKLNSTKF EDWIQKKKAP AVPHMKKLYH DIRERGIKIF LISSRKEYLR 120
  121 SATVDNLIQA GYYGWSNLML RGLEDQQKEV KQYKSEKRKW LMSLGYRVWG VMGDQWSSFA 180
  181 GCPLPRRTFK LPNSIYYVA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.522879
Match: 2i33A
Description: No description for 2i33A was found.

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