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View Structure Prediction Details

Protein: NAC81_ARATH
Organism: Arabidopsis thaliana
Length: 283 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC81_ARATH.

Description E-value Query
Range
Subject
Range
gi|31322568 - gi|31322568|gb|AAP35049.1| NAC-domain protein 3 [Brassica napus]
372.0 [0..1] [283..1]
NA102_ARATH - NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1
345.0 [0..1] [283..44]
gi|21105748 - gi|21105748|gb|AAM34773.1|AF509873_1 nam-like protein 10 [Petunia x hybrida]
312.0 [0..3] [276..4]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSELNLPAG FRFHPTDEEL VKFYLCRKCA SEQISAPVIA EIDLYKFNPW ELPEMSLYGE  60
   61 KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP KTLGIKKALV FYAGKAPKGI 120
  121 KTNWIMHEYR LANVDRSASV NKKNNLRLDD WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE 180
  181 QSSSPFDTSD ST

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.221849
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [193-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPTLQEDDSS SSGGHGHVVS PDVLEVQSEP KWGELEDALE AFDTSMFGSS MELLQPDAFV  60
   61 PQFLYQSDYF TSFQDPPEQK PFLNWSFAPQ G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.255 a.280.1 Description not found.
View Download 0.223 a.60.6 DNA polymerase beta, N-terminal domain-like
View Download 0.209 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle