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View Structure Prediction Details

Protein: TECR_ARATH
Organism: Arabidopsis thaliana
Length: 310 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TECR_ARATH.

Description E-value Query
Range
Subject
Range
gi|62866633 - gi|62866633|gb|AAY17262.1| TSC13 protein [Nicotiana benthamiana]
239.0 [0..1] [310..1]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVTVVSRSG REVLKAPLDL PDSATVADLQ EAFHKRAKKF YPSRQRLTLP VTPGSKDKPV  60
   61 VLNSKKSLKE YCDGNNNSLT VVFKDLGAQV SYRTLFFFEY LGPLLIYPVF YYFPVYKFLG 120
  121 YG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 2dzjA
Description: No description for 2dzjA was found.

Predicted Domain #2
Region A:
Residues: [123-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDCVIHPVQT YAMYYWCFHY FKRILETFFV HRFSHATSPI GNVFRNCAYY WSFGAYIAYY  60
   61 VNHPLYTPVS DLQMKIGFGF GLVCQVANFY CHILLKNLRD PSGAGGYQIP RGFLFNIVTC 120
  121 ANYTTEIYQW LGFNIATQTI AGYVFLAVAA LIMTNWALGK HSRLRKIFDG KDGKPKYPRR 180
  181 WVILPPFL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.136677
Match: PF02544.7
Description: No description for PF02544.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle