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View Structure Prediction Details

Protein: BCCIP_ARATH
Organism: Arabidopsis thaliana
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCCIP_ARATH.

Description E-value Query
Range
Subject
Range
gi|215737372, gi... - gi|50920169|ref|XP_470445.1| putative p21 C-terminal-binding protein [Oryza sativa (japonica cultiva...
gi|125546494 - gi|125546494|gb|EAY92633.1| hypothetical protein OsI_14377 [Oryza sativa Indica Group]
313.0 [0..19] [325..14]

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Predicted Domain #1
Region A:
Residues: [1-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRRPSSGRR VLKHQPLTFS PFMRLLSFAS MARRDLSHPE DCQCSDEDIS FDEKQKIPNL  60
   61 PRKGKEEQVS DSSDEEDSQE DVQADFEFFD PKPTDFHGVK ILLQNYLDDK EWDLSSFVDC 120
  121 ILEQTTVGTV VKVADDEDES VFALVTALNM ARDKDNKCFR ELKEFLRKVC SEKNIANNLE 180
  181 MLLEKKAQDV GLLVSQRVMN LPPQLLPPLY DGLFDEVSWA IEDEPTEKLR RSFRFKSYLL 240
  241 VTKIYKLKNP KQRKPRHGEE DIEDTVFLKP EDELFLELSS WSFTFPMRSQ LVTSQEMKNY 300
  301 QLMGLVMAVE ANKIPKFRQM LNSLID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle