YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: GGLO7_ARATH
Organism: Arabidopsis thaliana
Length: 252 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GGLO7_ARATH.

Description E-value Query
Range
Subject
Range
gi|3510250, gi|7... - pir||T02676 hypothetical protein At2g46750 [imported] - Arabidopsis thaliana, gi|3510250|gb|AAC33494...
316.0 [0..7] [252..321]

Back

Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSMRSHLA KQTRSVIFTG YPVIGSQDRI MSSGACLDSH QNGLITSCPW DPRIKGEFFY  60
   61 QTALSVPLTH VKDFINDIKA LVKIEPKSLC GLELNYGVLV RYVTSSPAYL RKEEKALDFD 120
  121 LTYYRSKDDP WTPRLYEDYM EEIEQMAILK YNALPHWGKN RNLAFDGAIK KYKNANTFLK 180
  181 VKERLDPWGL FSTEWTDQIL GLKGNVTIVK QGCAPEGLCI CSDDSHCAPN KGYMCRPGKV 240
  241 YKEARVCTLV TA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.30103
Match: 1i19A
Description: Cholesterol oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.237569247811196 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle