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View Structure Prediction Details

Protein: gi|63147396, gi|...
Organism: Arabidopsis thaliana
Length: 528 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|63147396, gi|....

Description E-value Query
Range
Subject
Range
gi|51971575 - gi|51971575|dbj|BAD44452.1| GTPase activator like protein of Rab-like small GTPases [Arabidopsis tha...
351.0 [0..1] [528..1]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALRRIQTK STFPNPSSPS SPWTHLRSAF VLVTSSSPAS CSSSSDPHRL KSPWSRRKGK  60
   61 KPLTLRRWRR CFTPEGRIRN GGVDLLKKVR TRGIDPSIRS EVWPFLLGVC DFNSSEEERG 120
  121 ATRTWRRKVY ERLRRQCKRL QKQNSGTFKL NKINKTTQDD EHDSWSLAQD SESSCSDDAC 180
  181 SVHESLISDK DNTEDIGYMS DVSCTLDRDY NG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.95
Match: 2qq8A
Description: No description for 2qq8A was found.

Predicted Domain #2
Region A:
Residues: [213-528]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRHLNSESSD SDSSDENDYV QVAPSCEGKD ENSTSPSSIY ISRTKEDFVT WQRIIRLDAL  60
   61 RADTEWTPYS QSQALVSENR ARRAAEAVGL KDYSYLEPSK IFHAARLVAV LEAYALHDPE 120
  121 IGYCQGMSDL LSPILSVIPD DYEAFWCFVG FMKKARQNFR VDEVGITRQL NIVSKIIKSK 180
  181 DSQLYKHLEK VKAEDCFFVY RMVLVMFRRE LTLEQTLHLW EVIWADQAAI RAGMGKSSWS 240
  241 RRIKQRAPPT EDLLLYVVAA SVLQRRKVII EKYSSMEEIL RECHNMVGKL DVWKLLDDAH 300
  301 DLIVTLHAKI EHSIPQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.30103
Match: 2qq8A
Description: No description for 2qq8A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle