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View Structure Prediction Details

Protein: KCS17_ARATH
Organism: Arabidopsis thaliana
Length: 487 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCS17_ARATH.

Description E-value Query
Range
Subject
Range
KCS4_ARATH - 3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1
431.0 [0..6] [485..31]

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Predicted Domain #1
Region A:
Residues: [1-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDANGGPVQI RTQNYVKLGY HYLITHFFKL MFLPLMAVLF MNVSLLSLNH LQLYYNSTGF  60
   61 IFVITLAIVG SIVFFMSRPR SIYLLDYSCY LPPSSQKVSY QKFMNNSSLI QDFSETSLEF 120
  121 QRKILIRSGL GEETYLPDSI HSIPPRPTMA AAREEAEQVI FGALDNLFEN TKINPREIGV 180
  181 LVVNCSLFNP TPSLSAMIVN KYKLRGNIKS FNLGGMGCSA GVIAVDLASD MLQIHRNTFA 240
  241 LVVSTENITQ NWYFGNKKAM LIPNCLFRVG GSAVLLSNKP LDRKRSKYKL VHTVRTHKGS 300
  301 DENAFNCVYQ EQDECLKTGV SLSKDLMAIA GEALKTNITS LGPLVLPISE QILFFATFVA 360
  361 KRLFNDKKKK PYIPDFKLAL DHFCIHAGGR AVIDELEKSL KLSPKHVEAS RMTLHRFGNT 420
  421 SSSSIWYELA YTEAKGRMRK GNRVWQIAFG SGFKCNSAVW VALRNVEPSV NNPWEHCIHR 480
  481 YPVKIDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.522879
Match: 1bi5A
Description: Chalcone synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.61499311836466 bayes_pls_golite062009
transferase activity 1.02674433736465 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.95018443969363 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 0.71137845857094 bayes_pls_golite062009
acyltransferase activity 0.57223728364314 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle