YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|7799004, gi|1...
Organism: Arabidopsis thaliana
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7799004, gi|1....

Description E-value Query
Range
Subject
Range
gi|125545976 - gi|125545976|gb|EAY92115.1| hypothetical protein OsI_13822 [Oryza sativa Indica Group]
gi|115455805, gi... - gi|50355719|gb|AAT75244.1| putative calcium-dependent protein kinase [Oryza sativa (japonica cultiva...
290.0 [0..7] [392..81]

Back

Predicted Domain #1
Region A:
Residues: [1-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRSMSSDRL VQWDDDSNRP HKKLKHSTTI SETSVIEDDA DSSTQMGHSI KTIPKSDRWV  60
   61 VTRYLGNSSR SSVYLAESTI EGEEDYLPDE MTIKSIEISQ ASRLMNEEKF LSRLQNPFVV 120
  121 SFYGHEVTIE KDGKDPLLEK MYYNTLQEYS SGRNLATHIE KNRGKLPEDD VRSLANEILL 180
  181 GLKYIHEEKI IHCDIKPKNI ILPFENNLFA QIAGFGKAIK KWSVEYGEGL GHRIGTSRLL 240
  241 PPEVMMDMVL DYGADVWAFG CTVLEMLTGE RVWSEFGKLD WEGWKTLIGE SGSVPYIPNY 300
  301 LSDKAKDFLA KCLERDPSKR WSVDSLLEHE FLKWIDEDEE EEIYEEEEDD FYDGIEDVDE 360
  361 EYEANLEAEA AVEEEEAIEI DEEYPKEESE DDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.69897
Match: 2gnfA
Description: No description for 2gnfA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle