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View Structure Prediction Details

Protein: EB1B_ARATH
Organism: Arabidopsis thaliana
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EB1B_ARATH.

Description E-value Query
Range
Subject
Range
gi|109102362 - gi|109102362|ref|XP_001088113.1| PREDICTED: similar to dihydropyrimidinase-like 5 [Macaca mulatta]
416.0 [0..1] [284..778]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNIGMMDS AYFVGRNEIL SWINDRLHLN LSRIEEAASG AVQCQMLDMT FPGVVPMHKV  60
   61 NFEAKNEYEM IQNYKVMQEV FTKLKITKPL EVNRLVKGRP LDNLEFLQWL KRFCDSINGG 120
  121 IMNENYNPVE RRSRGGREKS VKGSSKISKS LQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.522879
Match: 1wyoA
Description: Solution structure of the CH domain of human microtubule-associated protein RP/EB family member 3
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [153-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNNMHHPPVA TSNKPAGPKQ AKSHGIGGGS NSSAEVQALS KEVEDLKVSV DLLEKERDFY  60
   61 FSKLRDIEIL CQTPELDDLP IVVAVKKILY ATDANESVLE EAQECLNQSL GLEGYEEEGK 120
  121 EEEEEEEEEE EEAAAAAETQ T

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.39794
Match: 1txqB
Description: Crystal structure of the EB1 C-terminal domain complexed with the CAP-Gly domain of p150Glued
Matching Structure (courtesy of the PDB):

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