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View Structure Prediction Details

Protein: gi|15240475, gi|...
Organism: Arabidopsis thaliana
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240475, gi|....

Description E-value Query
Range
Subject
Range
gi|21554173 - gi|21554173|gb|AAM63252.1| chaperone GrpE-like protein [Arabidopsis thaliana]
285.0 [0..1] [302..1]

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Predicted Domain #1
Region A:
Residues: [1-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVSRVLSRV SRSAGLRSSF SSVVTPKRNQ IPIVASRFHS LVHGTPNKLV AVPVSLRNHG  60
   61 TLDLNVLQRF GFFSSSSAEP KGNESNTEVP KTGETSENVE VGKATDAEID FDDLSRDDLV 120
  121 KLVSEKEDLL KVQQKDIMEM KDKFLRTYAE QQNLMDRTNR NAESAKKFAV QNFATSLLDV 180
  181 ADNLERASSV VKESFSKIDT SKDLAGATPL LKNLLEGVEM TEKQLAEVFR KAGLVKEDPL 240
  241 NEPFNPNRHN AVFQVPDASK PKGTIAHVLK SGYSLYDRVI RPAEVGVTCA VENQEGGKES 300
  301 AA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.69897
Match: 1dkgA
Description: Head domain of nucleotide exchange factor GrpE; Coiled-coil domain of nucleotide exchange factor GrpE
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle