YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|10177876, gi|...
Organism: Arabidopsis thaliana
Length: 654 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177876, gi|....

Description E-value Query
Range
Subject
Range
gi|113644761, gi... - gi|77549419|gb|ABA92216.1| stem rust resistance protein, putative [Oryza sativa (japonica cultivar-g...
338.0 [0..54] [624..130]

Back

Predicted Domain #1
Region A:
Residues: [1-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSRTLPSPA PVNSPFSSSV TPHHETTTTR IFPPLAAVGF SLFITLSICF CKFNRKRRSP  60
   61 AAVASSSTPP QKQPLHEFSY SSLRKATASF SPENRLGQGG FGSVFRGTLS PSSGGGNVAV 120
  121 KVMDSGSLQG EREFQNELFF AGKLDSPHVV SVIGFSRRRR SRLILVYELM DIGNLQDALL 180
  181 HRRSPELMIW NRRFLVAIDI AKGIEHLHSL NPCVIHGDLK PSNVLLDRFF SAKISDFGLA 240
  241 RLKSEHVEVK VVSESDVVED YGSVVEEVES VVTNTTGCDE SNFGFTDQSP VPLSSPEMVE 300
  301 QVPMTSPETV VSVSPEMGEK GSVLEVGNVV RSKDWWWKQE GNVGRGKGKE YVMQWIGSEV 360
  361 KEERQSSDWI AETAE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.0
Match: 2qkwB
Description: No description for 2qkwB was found.

Predicted Domain #2
Region A:
Residues: [376-654]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGKKVEKKKS SKRLEWWLSL DEEKEKGKKK KRRMVREWWK DEYRKELAKR MKKKKKKKTL  60
   61 ESEFYSDDVS GSVDQRRHGD GEVYRKKRRG VSSNSIGSSI DWWLDGLSGE QWRARRRNSQ 120
  121 DSVKSCGVSS TPSMRGTMCY VAPECCGNNI DDVSEKSDVY SYGVLLLVLV SGRRPLEVTG 180
  181 PASEIMLRAN LMSWARKLAR RGRLGDLVDE KLQLLDQEQA VLCIKVALQC LQKSPVSRPS 240
  241 MKDVLEMLTG AISPPDLPTE FSPSPQTRFP FKARRKQNR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.39794
Match: 2ac5A
Description: Structure of human Mnk2 Kinase Domain mutant D228G
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle