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View Structure Prediction Details

Protein: AB4B_ARATH
Organism: Arabidopsis thaliana
Length: 1286 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for AB4B_ARATH.

Predicted Domain #1
Region A:
Residues: [1-634]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF  60
   61 LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD KVSKVALKFV WLGIGTFAAA 120
  121 FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE 180
  181 KVGKAIQLLA TFVGGFVIAF VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA 240
  241 KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC 300
  301 SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET 360
  361 IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ IFRGFSLFIS SGTTVALVGQ 420
  421 SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI 480
  481 AYGKEDATTE EIKAAAELAN ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD 540
  541 PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE 600
  601 KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 151.0
Match: 3b5wA
Description: No description for 3b5wA was found.

Predicted Domain #2
Region A:
Residues: [635-687]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QKMSSIESFK QSSLRKSSLG RSLSKGGSSR GNSSRHSFNM FGFPAGIDGN VVQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.045757
Match: 1z47A
Description: Structure of the ATPase subunit CysA of the putative sulfate ATP-binding cassette (ABC) transporter from Alicyclobacillus acidocaldarius
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [688-1286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQEEDDTTQP KTEPKKVSIF RIAALNKPEI PVLILGSISA AANGVILPIF GILISSVIKA  60
   61 FFQPPKKLKE DTSFWAIIFM VLGFASIIAY PAQTFFFAIA GCKLVQRIRS MCFEKVVHME 120
  121 VGWFDEPENS SGTIGARLSA DAATIRGLVG DSLAQTVQNL SSILAGLIIA FLACWQLAFV 180
  181 VLAMLPLIAL NGFLYMKFMK GFSADAKKMY GEASQVANDA VGSIRTVASF CAEDKVMNMY 240
  241 SKKCEGPMKN GIRQGIVSGI GFGFSFFVLF SSYAASFYVG ARLVDDGKTT FDSVFRVFFA 300
  301 LTMAAMAISQ SSSLSPDSSK ADVAAASIFA IMDRESKIDP SVESGRVLDN VKGDIELRHV 360
  361 SFKYPARPDV QIFQDLCLSI RAGKTVALVG ESGSGKSTVI ALLQRFYDPD SGEITLDGVE 420
  421 IKSLRLKWLR QQTGLVSQEP ILFNETIRAN IAYGKGGDAS ESEIVSSAEL SNAHGFISGL 480
  481 QQGYDTMVGE RGIQLSGGQK QRVAIARAIV KDPKVLLLDE ATSALDAESE RVVQDALDRV 540
  541 MVNRTTIVVA HRLSTIKNAD VIAVVKNGVI VEKGKHDTLI NIKDGVYASL VQLHLTAAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 152.0
Match: 3b5xA
Description: No description for 3b5xA was found.

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