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View Structure Prediction Details

Protein: gi|15234815, gi|...
Organism: Arabidopsis thaliana
Length: 263 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15234815, gi|....

Description E-value Query
Range
Subject
Range
gi|94384048 - gi|94384048|emb|CAJ42901.1| putative eukaryotic translation initiation factor 4 gamma [Oryza glaberr...
234.0 [0..3] [263..520]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQGDSMLSL RPGGGRGGSR RFAPRFTLSS SSDLTNGGDA PSFAVKGSGG LLNDRPSALV  60
   61 QGNGSQQPKP VPSPTRQTVE KPKPQPQPQE VAPPTTT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 1q1qA
Description: Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [98-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLNTVELSRK TNSLLEEYFN VRLLDEALQC IEELKTPSYH PELVKEAISL GLEKNPPCVE  60
   61 PVAKLLEHLV SKNVLTPKDL RNGCLLYGSM LDDIGIDLPK APNNFGEILG SLVMAKASDS 120
  121 ELVKEILMKM GDEWFKKAVL EAVMRSVSES LLTTEAVEVE ACRGLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.09691
Match: 1ug3A
Description: C-terminal portion of human eIF4GI
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle