YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: RH5_ARATH
Organism: Arabidopsis thaliana
Length: 537 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RH5_ARATH.

Description E-value Query
Range
Subject
Range
gi|74210167 - gi|74210167|dbj|BAE21355.1| unnamed protein product [Mus musculus]
395.0 [0..8] [537..67]

Back

Predicted Domain #1
Region A:
Residues: [1-537]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGQKQELPV SGEPLAVESP MTNKKKKKSK KNKHTEENHE VEEVPQEVTN GVEEELSNKE  60
   61 KKKKRKREEK ESEKNKKKDV PEKKLEAEDL GEGESEQQKV VVTGKGVEEA KYAALKTFAE 120
  121 SNLPENVLDC CKTFEKPSPI QSHTWPFLLD GRDLIGIAKT GSGKTLAFGI PAIMHVLKKN 180
  181 KKIGGGSKKV NPTCLVLSPT RELAVQISDV LREAGEPCGL KSICVYGGSS KGPQISAIRS 240
  241 GVDIVIGTPG RLRDLIESNV LRLSDVSFVV LDEADRMLDM GFEEPVRFIL SNTNKVRQMV 300
  301 MFSATWPLDV HKLAQEFMDP NPIKVIIGSV DLAANHDVMQ IIEVLDERAR DQRLIALLEK 360
  361 YHKSQKNRVL VFALYKVEAE RLERFLQQRG WKAVSIHGNK AQSERTRSLS LFKEGSCPLL 420
  421 VATDVAARGL DIPDVEVVIN YTFPLTTEDY VHRIGRTGRA GKKGVAHTFF TPLNKGLAGE 480
  481 LVNVLREAGQ VVPADLLKFG THVKKKESKL YGAHFKEIAA DAPKATKITF DNSDDED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.0
Match: 2db3A
Description: No description for 2db3A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle