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View Structure Prediction Details

Protein: LECT1_ARATH
Organism: Arabidopsis thaliana
Length: 242 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LECT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|116312039, gi... - gi|125549128|gb|EAY94950.1| hypothetical protein OsI_016183 [Oryza sativa (indica cultivar-group)], ...
gi|125591085 - gi|125591085|gb|EAZ31435.1| hypothetical protein OsJ_014918 [Oryza sativa (japonica cultivar-group)]
268.0 [0..2] [240..31]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFHGDAEYA SEPDGMSKSG AIGLSRDNVP FSHGRAIFIN PVPFKPSSTS SSVYSFKTSF  60
   61 YFVISPRPKN PNPGHGLAFI IVPNDRNDSA SGLGYLSLVN RFSNGNPKNH LFAVEFDVFK 120
  121 DKSLGDINDN HIGINNNSVN STVSKKAGYW YQSKIEGKNR WLFKELKLSG NGYRAWIEYE 180
  181 NGKVTVTIGR SQEKPKRPLI EARVDLSKVF LEKMYVGFAG SMGRGVERHE ILDWSFENSA 240
  241 KD

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Detection Method: PSI-BLAST
Confidence: 57.221849
Match: 2bqpA
Description: Legume lectin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle