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View Structure Prediction Details

Protein: gi|12083230, gi|...
Organism: Arabidopsis thaliana
Length: 434 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12083230, gi|....

Description E-value Query
Range
Subject
Range
gi|134024818, gi... - gi|76657550|ref|XP_596391.2| PREDICTED: similar to pregnancy-associated glycoprotein-16 [Bos taurus]...
292.0 [0..19] [417..45]

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Predicted Domain #1
Region A:
Residues: [1-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSRIIIFS VLLLSIFSLS SSAQPSFRPK ALLLPVTKDP STLQYTTVIN QRTPLVPASV  60
   61 VFDLGGREFW VDCDQGYVST TYRSPRCNSA VCSRAGSIAC GTCFSPPRPG CSNNTCGAFP 120
  121 DNSITGWATS GEFALDVVSI QSTNGSNPGR FVKIPNLIFS CGSTSLLKGL AKGAVGMAGM 180
  181 GRHNIGLPLQ FAAAFSFNRK FAVCLTSGRG VAFFGNGPYV FLPGIQISRL QKTPLLINPG 240
  241 TTVFEFSKGE KSPEYFIGVT AIKIVEKTLP IDPTLLKINA STGIGGTKIS SVNPYTVLES 300
  301 SIYKAFTSEF IRQAAARSIK RVASVKPFGA CFSTKNVGVT RLGYAVPEIQ LVLHSKDVVW 360
  361 RIFGANSMVS VSDDVICLGF VDGGVNPGAS VVIGGFQLED NLIEFDLASN KFGFSSTLLG 420
  421 RQTNCANFNF TSTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.69897
Match: 1t6eX
Description: Crystal Structure of the Triticum aestivum xylanase inhibitor I
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.01508543827677 bayes_pls_golite062009
hydrolase activity 0.77554493777157 bayes_pls_golite062009
peptidase activity 0.68518523369811 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.43925265235199 bayes_pls_golite062009
endopeptidase activity 0.43264884039584 bayes_pls_golite062009
aspartic-type endopeptidase activity 0.30585066730542 bayes_pls_golite062009
aspartic-type peptidase activity 0.30585066730542 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle