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View Structure Prediction Details

Protein: RH10_ARATH
Organism: Arabidopsis thaliana
Length: 456 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RH10_ARATH.

Description E-value Query
Range
Subject
Range
gi|126636833, gi... - gi|78367052|ref|ZP_00837326.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Shewanella s...
377.0 [0..9] [456..1]

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Predicted Domain #1
Region A:
Residues: [1-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEENEVVKT FAELGVREEL VKACERLGWK NPSKIQAEAL PFALEGKDVI GLAQTGSGKT  60
   61 GAFAIPILQA LLEYVYDSEP KKGRRPDPAF FACVLSPTRE LAIQIAEQFE ALGADISLRC 120
  121 AVLVGGIDRM QQTIALGKRP HVIVATPGRL WDHMSDTKGF SLKSLKYLVL DEADRLLNED 180
  181 FEKSLNQILE EIPLERKTFL FSATMTKKVR KLQRACLRNP VKIEAASKYS TVDTLKQQYR 240
  241 FVAAKYKDCY LVYILSEMPE STSMIFTRTC DGTRFLALVL RSLGFRAIPI SGQMTQSKRL 300
  301 GALNKFKAGE CNILVCTDVA SRGLDIPSVD VVINYDIPTN SKDYIHRVGR TARAGRSGVG 360
  361 ISLVNQYELE WYIQIEKLIG KKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.69897
Match: 2i4iA
Description: No description for 2i4iA was found.

Predicted Domain #2
Region A:
Residues: [384-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEYPAEEDEV LSLLERVAEA KKLSAMNMKE SGGRKRRGED DEESERFLGG NKDRGNKERG  60
   61 GNKDKKSSKK FKR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.522879
Match: 1c4oA
Description: Nucleotide excision repair enzyme UvrB
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle