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View Structure Prediction Details

Protein: gi|15242741, gi|...
Organism: Arabidopsis thaliana
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242741, gi|....

Description E-value Query
Range
Subject
Range
gi|79326820 - gi|79326820|ref|NP_001031825.1| heavy-metal-associated domain-containing protein [Arabidopsis thalia...
208.0 [0..28] [392..1]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEKKEETAT KPQGEKKPTD GGITTVVMKL DMHCEGCGKK IKRIFKHFKG VEDVKIDYKS  60
   61 NKLTVIGNVD PVEVRDKVAD KIKRPVELVS TVAPPKKETP PSSGGAEKKP SPAAEEKPAE 120
  121 KKPAAVEKPG EKKEEKKKEE GEKKASPPPP PKESTVVLKT KLHCEGCEHK IKRIVNKIKG 180
  181 VNSVAIDSAK DLVIVKGIID VKQLTPYLNE KLKRTVEVVP AKKDD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 2ew9A
Description: No description for 2ew9A was found.

Predicted Domain #2
Region A:
Residues: [226-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAPVAAAAAA PAGGEKKDKV AGEKKEIKDV GEKKVDGGGE KKKEVAVGGG GGGGGGGGDG  60
   61 GAMDVKKSEY NGYGYPPQPM YYYPEGQVYG QQHYMMQGQS SQSYVQEPYS NQGYVQESYM 120
  121 NQGYGQGYGQ EAPPPPYMNQ QGYADPYGHM RAPELFSDEN PNGCSVM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.154902
Match: 1m2vB
Description: Sec24
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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