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View Structure Prediction Details

Protein: AOC3_ARATH
Organism: Arabidopsis thaliana
Length: 258 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AOC3_ARATH.

Description E-value Query
Range
Subject
Range
AOC2_ARATH - Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1
413.0 [0..4] [258..2]

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Predicted Domain #1
Region A:
Residues: [1-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSAAMSL ESISMTTLNN LSRNHQSHRS SLLGFSRSFQ NLGISSNGPD FSSRSRSTTS  60
   61 KNLNVTRAFF WNWGKKTENS RPSKIQELNV YELNEGDRNS PAVLKLGKKP TELCLGDLVP 120
  121 FTNKLYTGDL KKRVGITAGL CVLIQHVPEK SGDRFEASYS FYFGDYGHLS VQGQYLTYED 180
  181 TFLAVTGGSG IFEGAYGQVK LRQLVYPTKL FYTFYLKGLA NDLPLELTGT AVTPSKDVKP 240
  241 APEAKAMEPS GVISNFTN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.522879
Match: 1z8kA
Description: X-ray structure of allene oxide cyclase from Arabidopsis thaliana at3g25770
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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