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View Structure Prediction Details

Protein: gi|8953400, gi|1...
Organism: Arabidopsis thaliana
Length: 700 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8953400, gi|1....

Description E-value Query
Range
Subject
Range
DXS_CAPAN - Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1
589.0 [0..4] [699..2]

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Predicted Domain #1
Region A:
Residues: [1-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC  60
   61 SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD EIRTELHSVL WKKTQKSMNP 120
  121 SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES 180
  181 EYDSFGTGHG CNSISAGLGL AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN 240
  241 MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE 300
  301 WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV 360
  361 ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI VVVHAGMEMD PSLLTFQERF 420
  421 PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT 480
  481 SAGLVGSDGP VQCGAFDIAF MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG 540
  541 SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA 600
  601 RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG 660
  661 YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 142.0
Match: 2o1sA
Description: No description for 2o1sA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle