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View Structure Prediction Details

Protein: gi|6862927, gi|1...
Organism: Arabidopsis thaliana
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6862927, gi|1....

Description E-value Query
Range
Subject
Range
gi|147906885, gi... - gi|54311441|gb|AAH84772.1| LOC495312 protein [Xenopus laevis], gi|147906885|ref|NP_001088448.1| hypo...
255.0 [0..15] [293..18]

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Predicted Domain #1
Region A:
Residues: [1-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMVRDNQFL NLKLSPIQAP TTIPPCRFPI IPATKVSATV SSCASNTFSV ANLDRISVLG  60
   61 SGNGGTVFKV KDKTTSEIYA LKKVKENWDS TSLREIEILR MVNSPYVAKC HDIFQNPSGE 120
  121 VSILMDYMDL GSLESLRGVT EKQLALMSRQ VLEGKNYLHE HKIVHRDIKP ANLLRSSKEE 180
  181 VKIADFGVSK IVVRSLNKCN SFVGTFAYMS PERLDSEADG VTEEDKSNVY AGDIWSFGLT 240
  241 MLEILVGYYP MLPDQAAIVC AVCFGEPPKA PEECSDDLKS FMDCCLRKKA SER

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.0
Match: 1zmuA
Description: Catalytic and ubiqutin-associated domains of MARK2/PAR-1: Wild type
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle