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View Structure Prediction Details

Protein: CDSP_ARATH
Organism: Arabidopsis thaliana
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDSP_ARATH.

Description E-value Query
Range
Subject
Range
gi|28280043, gi|... - gi|28280043|gb|AAH45245.1| Txndc5-prov protein [Xenopus laevis], gi|148224184|ref|NP_001080444.1| th...
219.0 [0..2] [293..87]

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Predicted Domain #1
Region A:
Residues: [1-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVANFLAK PISTVVPRPS SAVASTSSFV FFNHKTNPLF RRKNLPKRLF SAVKIKAGAA  60
   61 SPGKVGTPPA NDEKVQKIHS GEEFDVALKN AKSKLVVAEF ATSKSDQSNK IYPFMVELSR 120
  121 TCNDVVFLLV MGDESDKTRE LCRREKIEKV PHFSFYKSME KIHEEEGIEP DQLMGDVLYY 180
  181 GDNHSAVVQL HGRPDVEKLI DENRTGGKLI VLDVGLKHCG PCVKVYPTVL KLSRSMSETV 240
  241 VFARMNGDEN DSCMEFLKDM NVIEVPTFLF IRDGEIRGRY VGSGKGELIG EILRYSGVRV 300
  301 TY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 1a8lA
Description: PROTEIN DISULFIDE OXIDOREDUCTASE FROM ARCHAEON PYROCOCCUS FURIOSUS
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142133664747919 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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