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View Structure Prediction Details

Protein: MP703_ARATH
Organism: Arabidopsis thaliana
Length: 629 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MP703_ARATH.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
284.0 [0..4] [626..1869]

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Predicted Domain #1
Region A:
Residues: [1-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEGGYAFEV NNGRPTASEF GTTARISSPS LTMSSSFREG GGGGGSKGLT RRRSMKPSFD  60
   61 ADNEFITLLH GSDPVKVELN RLENDVRDKD RELSESQAEI KALRLSERQR EKAVEELTEE 120
  121 LGKMSEKLKL TENLLDSKNL EIKKINEEKR ASMAAQFAAE ATLRRVHAAQ KDDDMPPIEA 180
  181 ILAPLEAELK LARHEIVKLQ DDNRALDRLT KSKEAALLDA ERTVQSALAK ASMVDDLQNK 240
  241 NQELMKQIEI CQEENRILDK LHRQKVAEVE KFTQTVRELE EAVLAGGTAA NAVRDYQRKF 300
  301 QEMNEER

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [308-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RILDRELARA KVSASRVATV VANEWKDGSD KVMPVKQWLE ERRFLQGEMQ QLRDKLAIAD  60
   61 RAAKSEAQLK EKFQLRLR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 2iw5A
Description: No description for 2iw5A was found.

Predicted Domain #3
Region A:
Residues: [386-629]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLEESLRGPS SSGNRSTPEG RSMSNGPSRR QSLGGADIIP KLTSNGFFSK RSPSSQFRSL  60
   61 NASTSTILKH AKGTSRSFDG GSRSLDRSKV LTNEPRSKFP LNQSSEGTSG GGSPNSTKQG 120
  121 DSEKAAGTNN DSVPGVLHDL LQKEVITLRK AANDKDQSLR DKDEAIEMLA KKVETLTKAM 180
  181 EVEAKKMRRE VAAMEKEVSA MRVDNKGSDS RTRRHSTNSK GASTTAQLLS GRGSGRMGMT 240
  241 RSTQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 43.886057
Match: PF07058.2
Description: No description for PF07058.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle