Protein: | TCP5_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 360 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TCP5_ARATH.
Description | E-value | Query Range |
Subject Range |
|
292.0 | [0..16] | [331..46] |
|
289.0 | [0..16] | [331..47] |
|
288.0 | [0..16] | [331..46] |
|
283.0 | [0..16] | [331..46] |
|
266.0 | [0..20] | [331..53] |
|
265.0 | [0..16] | [331..46] |
|
264.0 | [0..25] | [331..55] |
|
263.0 | [0..16] | [331..48] |
|
263.0 | [0..16] | [331..46] |
Region A: Residues: [1-194] |
1 11 21 31 41 51 | | | | | | 1 MRSGECDEEE IQAKQERDQN QNHQVNLNHM LQQQQPSSVS SSRQWTSAFR NPRIVRVSRT 60 61 FGGKDRHSKV CTVRGLRDRR IRLSVPTAIQ LYDLQDRLGL SQPSKVIDWL LEAAKDDVDK 120 121 LPPLQFPHGF NQMYPNLIFG NSGFGESPSS TTSTTFPGTN LGFLENWDLG GSSRTRARLT 180 181 DTTTTQRESF DLDK |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [195-279] |
1 11 21 31 41 51 | | | | | | 1 GKWIKNDENS NQDHQGFNTN HQQQFPLTNP YNNTSAYYNL GHLQQSLDQS GNNVTVAISN 60 61 VAANNNNNLN LHPPSSSAGD GSQLF |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.522 | N/A | N/A | d.58.53 | Description not found. |
View | Download | 0.428 | N/A | N/A | d.68.6 | DNA-binding protein Sso10b (AlbA) |
View | Download | 0.412 | N/A | N/A | a.4.1 | Homeodomain-like |
View | Download | 0.362 | N/A | N/A | d.169.1 | C-type lectin-like |
View | Download | 0.340 | N/A | N/A | a.251.1 | Description not found. |
View | Download | 0.286 | N/A | N/A | d.12.1 | Ribosomal proteins L23 and L15e |
View | Download | 0.285 | N/A | N/A | d.68.6 | DNA-binding protein Sso10b (AlbA) |
View | Download | 0.277 | N/A | N/A | d.88.1 | SRF-like |
View | Download | 0.267 | N/A | N/A | b.1.2 | Fibronectin type III |
View | Download | 0.265 | N/A | N/A | a.55.1 | IHF-like DNA-binding proteins |
View | Download | 0.261 | N/A | N/A | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
Region A: Residues: [280-360] |
1 11 21 31 41 51 | | | | | | 1 FGPTPPAMSS LFPTYPSFLG ASHHHHVVDG AGHLQLFSSN SNTASQQHMM PGNTSLIRPF 60 61 HHLMSSNHDT DHHSSDNESD S |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.849 | d.58.4 | Dimeric alpha+beta barrel |
View | Download | 0.724 | d.58.4 | Dimeric alpha+beta barrel |
View | Download | 0.656 | d.58.4 | Dimeric alpha+beta barrel |
View | Download | 0.652 | d.58.4 | Dimeric alpha+beta barrel |
View | Download | 0.628 | d.58.4 | Dimeric alpha+beta barrel |
View | Download | 0.515 | d.58.3 | Protease propeptides/inhibitors |
View | Download | 0.476 | d.52.6 | BolA-like |
View | Download | 0.472 | a.36.1 | Signal peptide-binding domain |
View | Download | 0.469 | d.52.7 | Ribosome-binding factor A, RbfA |
View | Download | 0.428 | d.52.7 | Ribosome-binding factor A, RbfA |
View | Download | 0.410 | d.58.4 | Dimeric alpha+beta barrel |
View | Download | 0.356 | d.52.5 | Probable GTPase Der, C-terminal domain |
View | Download | 0.351 | d.52.7 | Ribosome-binding factor A, RbfA |