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View Structure Prediction Details

Protein: P4KG1_ARATH
Organism: Arabidopsis thaliana
Length: 561 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P4KG1_ARATH.

Description E-value Query
Range
Subject
Range
gi|19310381 - gi|19310381|gb|AAL84930.1| At2g40850/T20B5.5 [Arabidopsis thaliana]
708.0 [0..1] [561..1]
gi|92894700 - gi|92894700|gb|ABE92357.1| Phosphatidylinositol 3- and 4-kinase, catalytic [Medicago truncatula]
589.0 [0..35] [560..79]
gi|42408480, gi|... - gi|50947107|ref|XP_483081.1| phosphatidylinositol 3- and 4-kinase family-like [Oryza sativa (japonic...
gi|125561987 - gi|125561987|gb|EAZ07435.1| hypothetical protein OsI_29690 [Oryza sativa Indica Group]
564.0 [0..35] [560..66]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNCLATTIII TCKPTLISDM AVAIDPFSDK FPYFNRSSQR CRLQSLTNLD FNFLAQSFNH  60
   61 TFEDDNIHRS VSSPCFSIAA SANMEEDLKA TTAPRIEILG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.819 a.77.1 DEATH domain

Predicted Domain #2
Region A:
Residues: [101-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQRVPTVRAL VAEVTMAMVS GAQPLLLPSG MGGAYLLQTG KGHNIAVAKP VDEEPLAFNN  60
   61 PKKSGNLMLG QPGMKHSIPV GE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.884 N/A N/A d.106.1 Sterol carrier protein, SCP

Predicted Domain #3
Region A:
Residues: [183-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGIRELAAYL LDYQGFSGVP PTALVSISHV PFHVSDAFSF SSMPYKVASL QRFVGHDFDA  60
   61 GELGPGSFTA TSVHRIGILD VRLLNLDRHA GNMLVKRCDK KEAYNRLGTA ELVPIDHGLC 120
  121 LPECLDDPYF EWLNWPQALV PF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [325-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDTELDYISN LDPFKDAELL RTELHSLPES AIRVLVVCTV FLKQAAAAGL CLAEIGEKMT  60
   61 RDFSKGEESF SLLETLCTKA KASVFGKTSE DSDYSHEGNE VNTELQCGMF KFDGGDTPCE 120
  121 AEISEVFHVS KPPLVPRGP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [464-561]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RANTIPNDVT ASMSSSQNQR ITHQEKSAKE KKRGGKQERC TVRSKSPPIS PNHDESKGVS  60
   61 FVDMTTVEWD TFLQSFQTLL QDALSKGSTP RLGCSCEI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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