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View Structure Prediction Details

Protein: FCL2_ARATH
Organism: Arabidopsis thaliana
Length: 328 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FCL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|41205692 - gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus]
301.0 [0..20] [327..3]

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Predicted Domain #1
Region A:
Residues: [1-328]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNTGSEMK SGSFMLEKSA KIFVAGHRGL VGSAIVRKLQ DQGFTNLVLR THSELDLTSQ  60
   61 SDVESFFATE KPVYVILAAA KVGGIHANNT YPADFIGVNL QIQTNVIHSA YTHGVKKLLF 120
  121 LGSSCIYPKF APQPIPESAL LTGPLEPTNE WYAIAKIAGI KMCQAYRLQH QWDAISGMPT 180
  181 NLYGQNDNFH PENSHVLPAL MRRFHEAKAN NADEVVVWGS GSPLREFLHV DDLADACVFL 240
  241 MDQYSGFEHV NVGSGVEVTI KELAELVKEV VGFKGKLVWD TTKPDGTPRK LMDSSKLASL 300
  301 GWTPKISLKD GLSQTYEWYL ENVVQKKQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.0
Match: 1bsvA
Description: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
UDP-glucose 4-epimerase activity 2.13934644118967 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 1.03956654822048 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.82673050487418 bayes_pls_golite062009
protein binding 0.381642189238843 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle