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View Structure Prediction Details

Protein: TATA_ARATH
Organism: Arabidopsis thaliana
Length: 147 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TATA_ARATH.

Description E-value Query
Range
Subject
Range
gi|32307512 - gi|32307512|gb|AAP79161.1| Tha4 plastid transport protein [Bigelowiella natans]
109.0 [0..15] [142..74]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSVATLSS PPPVSLPLLS SSRSSFFSNC FTVTTRPNTR SLVAIGRRIR QEPTRKPLTC  60
   61 NALFGLGVPE LAVIAGVAAL LFGPKKLPEI GKSIGKTVKS FQQAAKEFES ELKTEPEESV 120
  121 AESSQVATSN KEEEKKTEVS SSSKENV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.974
Match: 1f6gA
Description: Potassium channel protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle