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View Structure Prediction Details

Protein: TPS9_ARATH
Organism: Arabidopsis thaliana
Length: 867 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for TPS9_ARATH.

Predicted Domain #1
Region A:
Residues: [1-572]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRSCANFL DLASWDLLDF PQTQRALPRV MTVPGIISEL DGGYSDGSSD VNSSNSSRER  60
   61 KIIVANMLPL QAKRDTETGQ WCFSWDEDSL LLQLRDGFSS DTEFVYIGSL NADIGISEQE 120
  121 EVSHKLLLDF NCVPTFLPKE MQEKFYLGFC KHHLWPLFHY MLPMFPDHGD RFDRRLWQAY 180
  181 VSANKIFSDR VMEVINPEED YVWIHDYHLM VLPTFLRKRF NRIKLGFFLH SPFPSSEIYR 240
  241 TLPVRDDLLR GLLNCDLIGF HTFDYARHFL SCCSRMLGLD YESKRGHIGL DYFGRTVFIK 300
  301 ILPVGIHMGR LESVLNLPST AAKMKEIQEQ FKGKKLILGV DDMDIFKGIS LKLIAMERLF 360
  361 ETYWHMRGKL VLIQIVNPAR ATGKDVEEAK KETYSTAKRI NERYGSAGYQ PVILIDRLVP 420
  421 RYEKTAYYAM ADCCLVNAVR DGMNLVPYKY IICRQGTPGM DKAMGISHDS ARTSMLVVSE 480
  481 FIGCSPSLSG AIRVNPWDVD AVAEAVNLAL TMGETEKRLR HEKHYHYVST HDVGYWAKSF 540
  541 MQDLERACRE HYNKRCWGIG FGLSFRVLSL SP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.69897
Match: 1uqtA
Description: Trehalose-6-phosphate from E. coli bound with UDP-2-fluoro glucose.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [573-867]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFRKLSIDHI VSTYRNTQRR AIFLDYDGTL VPESSIIKTP NAEVLSVLKS LCGDPKNTVF  60
   61 VVSGRGWESL SDWLSPCENL GIAAEHGYFI RWSSKKEWET CYSSAEAEWK TMVEPVMRSY 120
  121 MDATDGSTIE YKESALVWHH QDADPDFGAC QAKELLDHLE SVLANEPVVV KRGQHIVEVK 180
  181 PQGVSKGLAV EKVIHQMVED GNPPDMVMCI GDDRSDEDMF ESILSTVTNP DLPMPPEIFA 240
  241 CTVGRKPSKA KYFLDDVSDV LKLLGGLAAA TSSSKPEYQQ QSSSLHTQVA FESII

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1rkqA
Description: Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle