Protein: | SCKL1_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 471 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCKL1_ARATH.
Description | E-value | Query Range |
Subject Range |
|
272.0 | [0..18] | [465..13] |
|
259.0 | [0..98] | [466..22] |
|
256.0 | [0..104] | [463..13] |
|
255.0 | [0..51] | [465..14] |
Region A: Residues: [1-100] |
1 11 21 31 41 51 | | | | | | 1 MASLLIFPHL HHFDSSLDRR EVLVVRHSQA SRRFLTPKAS INGSGITNGA AAETTSKPSR 60 61 KGRKKKQTST VIEKDNTETD PELNPELADY DDGIEFPYDD |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.243 | a.24.17 | Group V grass pollen allergen |
View | Download | 0.243 | a.24.17 | Group V grass pollen allergen |
View | Download | 0.208 | c.26.1 | Nucleotidylyl transferase |
Region A: Residues: [101-471] |
1 11 21 31 41 51 | | | | | | 1 PPLVCCFGAV QKEFVPVVRV HDNPMHPDMY SQWKMLQWDP PEFGRAPGGP PSNVAISHVR 60 61 LGGRAAFMGK VGEDDFGDEL VLMMNQERVQ TRAVKFDENS KTACTRVKIK FKDGKMMAET 120 121 VKEPPEDSLF ASELNLAVLK EARIFHFNSE VLTSPTMQST LFTAIQWSKK FGGLIFFDLN 180 181 LPLPLWRSRN ETRKLIKKAW NEANIIEVSQ QELEFLLDED YYERRRNYTP QYFAEDFDQT 240 241 KNRRDYYHYT PEEIKSLWHD KLKLLVVTDG TLRLHYYTPT FDGVVIGTED VLITPFTCDR 300 301 TGSGDAVVAG IMRKLTTCPE MFEDQDVMER QLRFAVAAGI IAQWTIGAVR GFPTESATQN 360 361 LKEQVYVPSM W |
Detection Method: | |
Confidence: | 56.522879 |
Match: | 1tyyA |
Description: | Crystal structure of aminoimidazole riboside kinase from Salmonella enterica |
Matching Structure (courtesy of the PDB): |