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View Structure Prediction Details

Protein: AHL21_ARATH
Organism: Arabidopsis thaliana
Length: 285 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AHL21_ARATH.

Description E-value Query
Range
Subject
Range
gi|110289622, gi... - gi|37537056|ref|NP_922830.1| putative AT-Hook DNA-binding protein [Oryza sativa (japonica cultivar-g...
gi|125533038 - gi|125533038|gb|EAY79603.1| hypothetical protein OsI_34743 [Oryza sativa Indica Group]
235.0 [0..1] [279..64]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND  60
   61 NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVIVTRESAN TLRAHILEVG SGCDVFECIS TYARRRQRGI CVLSGTGTVT NVSIRQPTAA  60
   61 GAVVTLRGTF EILSLSGSFL PPPAPPGATS LTIFLAGAQG QVVGGNVVGE LMAAGPVMVM 120
  121 AASFTNVAYE RLPLDEHEEH LQSGGGGGGG NMYSEATGGG GGLPFFNLPM SMPQIGVESW 180
  181 QGNHAGAGRA PF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.522879
Match: 2nmuA
Description: No description for 2nmuA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.210430303475354 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle